BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A08SP1|AL429670
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1023 1049 0.0
3x_Contig441 181 3e-45
>3x_Contig1023
Length = 4339
Score = 1049 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 322 cgaatttttttccagaggcaatcggtgaaatcaaatgcgtattctttttcgtcaactccg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4329 cgaatttttttccagaggcaatcggtgaaatcaaatgcgtattctttttcgtcaactccg 4270
Query: 382 tgctacagataccgcccaaggcttccaccagcagctggatgtaatatctttgctctccat 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4269 tgctacagataccgcccaaggcttccaccagcagctggatgtaatatctttgctctccat 4210
Query: 442 aataattcgtataggttgctttgagttcattatttgaaaagataggtttcttcaatggtg 501
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4209 aatacttcgtataggttgctttgagttcattatttgacaagataggtttcttcaatggtg 4150
Query: 502 ataacaagagtttggacattggatgtataaatttatgcatttgccatacgtaaaacaacc 561
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4149 ataacaagagtttggacattggatgtataactttatgcatttgccatacgtaaaacaacc 4090
Query: 562 aaggaatgttagcacatactattctacattcgtttgcattttttacaccttccgtgtttg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4089 aaggaatgttagcacatactattctacattcgtttgcattttttacaccttccgtgtttg 4030
Query: 622 ccgaatagcctatataaagatcggcttgagattttttcaactgactagggccagctacta 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4029 ccgaatagcctatataaagatcggcttgagattttttcaactgactagggccagctacta 3970
Query: 682 atgtaatttgggcacctaagcattttttgatccaatttaataggaatttataactggtac 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3969 atgtaatttgggcacctaagcattttttgatccaatttaataggaatttataactggtac 3910
Query: 742 caggtagggctaaatcgtctcccagtattatcttttttcccagctggaaccctggtatta 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3909 caggtagggctaaatcgtctcccagtattatcttttttcccagctggaaccctggtatta 3850
Query: 802 ccttccaatcatcaatactgttcaatgttctatcccagagcttttgacttttctctttca 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3849 ccttccaatcatcaatactgttcaatgttctatcccagagcttttgacttttctctttca 3790
Query: 862 a 862
|
Sbjct: 3789 a 3789
>3x_Contig441
Length = 2196
Score = 181 bits (91), Expect = 3e-45
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 tggttagatgatttagaggtttgagtcaaatgttcttccgctgctggtgtggtaggcatt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2103 tggttagatgatttagaggtttgagtcanatgttcttccgctgctggtgtggtaggcatt 2162
Query: 61 gaaatgggatgttctttgttcagctgttgagaat 94
||||||||||||||||||||||||||||||||||
Sbjct: 2163 gaaatgggatgttctttgttcagctgttgagaat 2196
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6739
Number of Sequences: 1807
Number of extensions: 6739
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)